Detection method details
Name: |
QT-TAX-OS-002 |
Description: |
Quantitative real-time PCR (TaqMan) method for detection of rice phospholipase D alpha 2 gene (EU-RL GMFF GMOMETHODS database as of April 19, 2016) |
Comment: |
Target is the phospholipase D alpha 2 (PLD) gene from rice.
Amplicon sequence based on GenBank AP014962 (Oryza sativa Japonica, cultivar: Nipponbare) and GenBank CP012614.1 (Oryza sativa Indica cultivar: RP Bio-226) |
Validation: |
ring trial validation |
Standardisation: |
EU reference method |
Related Methods: |
Type: |
taxon-specific |
Target Species name: |
Oryza sativa |
-
Oligonucleotides:
Forward Primer
Name:
PLD-GR ForSequence:
GGCAAGAACAACACCATTGACASize:
22
Reverse Primer
Name:
PLD-GR RevSequence:
CGGCTTTCCATGCAAATGASize:
19
Probe
Name:
PLD-GR ProbeSequence:
ATTCGCCGCGCCAAGAACTTCASize:
22
-
Amplicon:
Sequence:
GGCAAGAACAACACCATTGACAGGAGCATCCAAGATGCATACATCCACGCAATTCGCCGCGCCAAGAACTTCATCTACATCGAGAATCAGTACTTCCTTGGCAGCTCATTTGCATGGAAAGCCGSize:
124
Documents
Citation | Type | Local copy |
---|---|---|
EU-RL GMFF GMOMETHODS database; QT-TAX-OS-002 | EU reference method protocol |